Research Group Publications

  • Selenium nanoparticles in poultry feed modify gut microbiota and increase abundance of Faecalibacterium prausnitzii
    S Gangadoo, I Dinev, J Chapman, RJ Hughes, TTH Van, RJ Moore,D Stanley
    Applied microbiology and biotechnology 102 (3), 1455-1466 (2018) 

  • An insight into intestinal mucosal microbiota disruption after stroke
    D Stanley, RJ Moore, CHY Wong
    Scientific reports 8 (1), 568 (2018) 

  • The synthesis and characterisation of highly stable and reproducible selenium nanoparticles
    S Gangadoo, D Stanley, RJ Hughes, RJ Moore, J Chapman
    Inorganic and Nano-Metal Chemistry 47 (11), 1568-1576 (2017)

  • Effects of concentration of corn distillers dried grains with solubles and enzyme supplementation on cecal microbiota and performance in broiler chickens, 
    Abudabos, A.M., Al-Atiyat, R.M., Albatshan, H.A., Aljassim, R., Aljumaah, M.R., Alkhulaifi, M.M., and Stanley, D.
    Applied Microbiology and Biotechnology 101 (18), 7017-7026 (2017).

  • The effect of corn distiller’s dried grains with solubles (DDGS) fortified with enzyme on growth performance of broiler.
    Abudabos, A.M., Al-Atiyat, R.M., Stanley, D., Aljassim, R., and Albatshan, H.A.
    Environmental Science and Pollution Research. 24 (26) 21412–21. (2017).

  • The shift work and health research agenda: Considering changes in gut microbiota as a pathway linking shift work, sleep loss and circadian misalignment, and metabolic disease.
    Reynolds, A.C., Paterson, J.L., Ferguson, S.A., Stanley, D., Wright, K.P., and Dawson, D.
    Sleep Medicine Reviews 34, 3-9. 12 (2017).

  • The time-course of broiler intestinal microbiota development after administration of cecal contents to incubating eggs.
    Donaldson, E.E., Stanley, D., Hughes, R.J., and Moore, R.J.
    PeerJ 5, e3587. (2017)

  • Zeolite food supplementation reduces abundance of enterobacteria.
    Prasai, T. P., Walsh, K. B., Bhattarai, S. P., Midmore D. J., Van T. T., Moore R. J. and Stanley, D
    Microbiological Research 195: 24-30. (2017).

  • Gut microbial metabolites limit the frequency of autoimmune T cells and protect against type 1 diabetes
    E Mariño, JL Richards, KH McLeod, D Stanley, YA Yap, J Knight, Stanley D
    Nature Immunology (2017)

  • Effects of concentration of corn distillers dried grains with solubles and enzyme supplementation on cecal microbiota and performance in broiler chickens,
    Abudabos, A.M., Al-Atiyat, R.M., Albatshan, H.A., Aljassim, R., Aljumaah, M.R., Alkhulaifi, M.M., and Stanley, D.
    Applied Microbiology and Biotechnology 101 (18), 7017-7026 (2017).

  • Sorghum and wheat differentially affect caecal microbiota and associated performance characteristics of meat chickens
    E Crisol-Martínez, D Stanley, MS Geier, RJ Hughes, RJ Moore
    PeerJ 5, e3071 (2017)

  • A gut reaction: The combined influence of exercise and diet on gastrointestinal microbiota in rats
    R Batacan, A Fenning, VJ Dalbo, AT Scanlan, MJ Duncan, RJ Moore, Stanley D
    Journal of Applied Microbiology (2017)

  • Understanding the mechanisms of zinc bacitracin and avilamycin on animal production: linking gut microbiota and growth performance in chickens
    E Crisol-Martínez, D Stanley, MS Geier, RJ Hughes, RJ Moore
    Applied Microbiology and Biotechnology, 1-13 (2017)

  • Zeolite food supplementation reduces abundance of enterobacteria
    TP Prasai, KB Walsh, SP Bhattarai, DJ Midmore, TTH Van, RJ Moore, ...
    Microbiological Research (2016)

  • Nanoparticles in feed: progress and prospects in poultry research
    S Gangadoo, D Stanley, RJ Hughes, RJ Moore, J Chapman
    Trends in Food Science & Technology (2016)

  • Translocation and dissemination of commensal bacteria in post-stroke infection
    D Stanley, LJ Mason, KE Mackin, YN Srikhanta, D Lyras, MD Prakash, ...
    Nature Medicine 22 (11), 1277-1284 (2016)

  • Gut microbial metabolites regulate autoimmune T cell responses and protect against type 1 diabetes
    E Marino, JL Richards, KH McLeod, YA Yap, D Stanley, CR Mackay
    EUROPEAN JOURNAL OF IMMUNOLOGY 46, 538-538 (2016)

  • Translocation and dissemination of commensal bacteria as a source of infection after stroke
    C Wong, D Stanley, K Mackin, D Lyras, M Prakash, K Nurgali, M Hill, ...
    EUROPEAN JOURNAL OF IMMUNOLOGY 46, 704-704 (2016)

  • Changes of microbiota, and their metabolites, in in the development of T1D
    KH McLeod, D Stanley, JL Richards, YA Yap, R Moore, CR Mackay, ...
    EUROPEAN JOURNAL OF IMMUNOLOGY 46, 290-290 (2016)

  • The shift work and health research agenda: Considering changes in gut microbiota as a pathway linking shift work, sleep loss and circadian misalignment, and metabolic disease
    AC Reynolds, JL Paterson, SA Ferguson, D Stanley, KP Wright, Stanley D
    Sleep Medicine Reviews (2016)

  • Experimental design considerations in microbiota/inflammation studies
    RJ Moore, D Stanley
    Clinical & Translational Immunology 5 (7), e92 (2016)

  • A low dose of an organophosphate insecticide causes dysbiosis and sex-dependent responses in the intestinal microbiota of the Japanese quail (Coturnix japonica)
    E Crisol-Martínez, LT Moreno-Moyano, N Wilkinson, T Prasai, PH Brown, Stanley D
    PeerJ 4, e2002 (2016)

  • The gastrointestinal tract microbiota of the Japanese quail, Coturnix japonica
    N Wilkinson, RJ Hughes, WJ Aspden, J Chapman, RJ Moore, D Stanley
    Applied microbiology and biotechnology 100 (9), 4201-4209 (2016)

  • Biochar, Bentonite and Zeolite Supplemented Feeding of Layer Chickens Alters Intestinal Microbiota and Reduces Campylobacter Load
    TP Prasai, KB Walsh, SP Bhattarai, DJ Midmore, TTH Van, RJ Moore, Stanley D
    PloS one 11 (4), e0154061 (2016)

  • Using Next-Generation Sequencing to Contrast the Diet and Explore Pest-Reduction Services of Sympatric Bird Species in Macadamia Orchards in Australia
    E Crisol-Martínez, LT Moreno-Moyano, KR Wormington, PH Brown, Stanley D
    PloS one 11 (3), e0150159 (2016)

  • Biochar, bentonite and zeolite supplemented feeding of chickens alters intestinal microbiota and reduces Campylobacter load
    T Prasai, K Walsh, S Bhattarai, D Midmore, T Van, R Moore, D Stanley
    PLoS One 11, 1-13 (2016)

  • Using Next-Generation Sequencing to Contrast the Diet and Explore Pest-Reduction Services of Sympatric Bird Species in Macadamia Orchards in Australia
    E Crisol-Martínez, LT Moreno-Moyano, KR Wormington, PH Brown, D Stanley
    PloS one 11 (3), e0150159 (2016)

  • Biochar, bentonite and zeolite supplemented feeding of chickens alters intestinal microbiota and reduces Campylobacter load
    T Prasai, K Walsh, S Bhattarai, D Midmore, T Van, R Moore, D Stanley
    PLoS One 11, 1-13 (2016)

  • Bacteria within the Gastrointestinal Tract Microbiota Correlated with Improved Growth and Feed Conversion: Challenges Presented for the Identification of Performance Enhancing Probiotic Bacteria
    D Stanley, RJ Hughes, MS Geier, RJ Moore
    Frontiers in microbiology 7 (2016)

  • Evidence that asthma is a developmental origin disease influenced by maternal diet and bacterial metabolites  
    AN Thorburn, CI McKenzie, S Shen, D Stanley, L Macia, LJ Mason, D Stanley
    Nature communications 6 (2015)

  • Metabolite-sensing receptors GPR43 and GPR109A facilitate dietary fibre-induced gut homeostasis through regulation of the inflammasome
    L Macia, J Tan, AT Vieira, K Leach, D Stanley, S Luong, M Maruya, D Stanley
    Nature communications 6 (2015)

  • Comparison of fecal and cecal microbiotas reveals qualitative similarities but quantitative differences
    D Stanley, MS Geier, H Chen, RJ Hughes, RJ Moore
    BMC microbiology 15 (1), 1 (2015)

  • Differential responses of cecal microbiota to fishmeal, Eimeria and Clostridium perfringens in a necrotic enteritis challenge model in chickens                                                   D Stanley, SB Wu, N Rodgers, RA Swick, RJ Moore
    PLoS One 9 (8), e104739 (2014)

  • Microbiota of the chicken gastrointestinal tract: influence on health, productivity and disease
    D Stanley, RJ Hughes, RJ Moore
    Applied microbiology and biotechnology 98 (10), 4301-4310 (2014)

  • Transcriptome analysis of pigeon milk production-role of cornification and triglyceride synthesis genes.
    MJ Gillespie, TM Crowley, VR Haring, SL Wilson, JA Harper, JS Payne, ...
    BMC genomics 15 (1), 185 (2014)

  • Two necrotic enteritis predisposing factors, dietary fishmeal and Eimeria infection, induce large changes in the caecal microbiota of broiler chickens
    SB Wu, D Stanley, N Rodgers, RA Swick, RJ Moore
    Veterinary microbiology 169 (3), 188-197 (2014)

  • Highly variable microbiota development in the chicken gastrointestinal tract
    D Stanley, MS Geier, RJ Hughes, SE Denman, RJ Moore
    PLoS One 8 (12), e84290 (2013)

  • Identification of differential duodenal gene expression levels and microbiota abundance correlated with differences in energy utilisation in chickens
    BM Konsak, D Stanley, VR Haring, MS Geier, RJ Hughes, GS Howarth, ...
    Animal production science 53 (12), 1269-1275    (2013)

  • Identification of chicken intestinal microbiota correlated with the efficiency of energy extraction from feed
    D Stanley, MS Geier, SE Denman, VR Haring, TM Crowley, RJ Hughes, ...
    Veterinary microbiology 164 (1), 85-92 (2013)

  • Transcriptome analysis of pigeon milk production–role of cornification and triglyceride synthesis genes
    MJ Gillespie, TM Crowley, VR Haring, SL Wilson, JA Harper, JS Payne, ...
    BMC genomics 14 (1), 1 (2013)

  • Genetic architecture of gene expression in the chicken
    D Stanley, NS Watson-Haigh, CJE Cowled, RJ Moore
    BMC genomics 14 (1), 1 (2013)

  • Intestinal microbiota associated with differential feed conversion efficiency in chickens
    D Stanley, SE Denman, RJ Hughes, MS Geier, TM Crowley, H Chen, ...
    Applied microbiology and biotechnology 96 (5), 1361-1369 (2012)

  • Functional similarities between pigeon ‘milk’and mammalian milk: induction of immune gene expression and modification of the microbiota
    MJ Gillespie, D Stanley, H Chen, JA Donald, KR Nicholas, RJ Moore, ...
    PloS one 7 (10), e48363 (2012)

  • Changes in the caecal microflora of chickens following Clostridium perfringens challenge to induce necrotic enteritis
    D Stanley, AL Keyburn, SE Denman, RJ Moore
    Veterinary microbiology 159 (1), 155-162 (2012)

  • Functional Similarities between Pigeon ‘Milk’and Mammalian Milk: Induction of
    MJ Gillespie, D Stanley, H Chen, JA Donald, KR Nicholas (2012)

  • Transcriptional changes associated with ethanol tolerance in Saccharomyces cerevisiae
    D Stanley, PJ Chambers, GA Stanley, A Borneman, S Fraser
    Applied microbiology and biotechnology 88 (1), 231-239 (2012)

  • Retrotransposon expression in ethanol-stressed Saccharomyces cerevisiae
    D Stanley, S Fraser, GA Stanley, PJ Chambers
    Applied microbiology and biotechnology 87 (4), 1447-1454 (2012)

  • The ethanol stress response and ethanol tolerance of Saccharomyces cerevisiae
    D Stanley, A Bandara, S Fraser, PJ Chambers, GA Stanley
    Journal of applied microbiology 109 (1), 13-24 (2012)

  • Generation and characterisation of stable ethanol-tolerant mutants of Saccharomyces cerevisiae
    D Stanley, S Fraser, PJ Chambers, P Rogers, GA Stanley
    Journal of industrial microbiology & biotechnology 37 (2), 139-149 (2012)